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Chapter 39: Combining Phage Display and Unrelated Orthogonal Approaches to Determine Interaction Networks Mediated by Protein Recognition Modules—References

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Cesareni G., Gimona M., Sudol M., and Yaffe M., eds. 2004. Modular protein domains. Wiley-VCH, Weinheim, Germany.

Cesareni G., Panni S., Nardelli G., and Castagnoli L. 2002. Can we infer peptide recognition specificity mediated by SH3 domains? FEBS Lett. 513: 38–44.

Dente L., Vetriani C., Zucconi A., Pelicci G., Lanfrancone L., Pelicci P.G., and Cesareni G. 1997. Modified phage peptide libraries as a tool to study specificity of phosphorylation and recognition of tyrosine containing peptides. J. Mol. Biol. 269: 694–703.

Durocher D. and Jackson S.P. 2002. The FHA domain. FEBS Lett. 513: 58–66.

Elia A.E., Cantley L.C., and Yaffe M.B. 2003. Proteomic screen finds pSer/pThr-binding domain localizing Plk1 to mitotic substrates. Science 299: 1228–1231.

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Fuh G. and Sidhu S.S. 2000. Efficient phage display of polypeptides fused to the carboxy-terminus of the M13 gene-3 minor coat protein. FEBS Lett. 480: 231–234.

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Salcini A.E., Confalonieri S., Doria M., Santolini E., Tassi E., Minenkova O., Cesareni G., Pelicci P.G., and Di Fiore P.P. 1997. Binding specificity and in vivo targets of the EH domain, a novel protein-protein interaction module. Genes Dev. 11: 2239–2249.

Santini C., Brennan D., Mennuni C., Hoess R.H., Nicosia A., Cortese R., and Luzzago A. 1998. Efficient display of an HCV cDNA expression library as C-terminal fusion to the capsid protein D of bacteriophage lambda. J. Mol. Biol. 282: 125–135.

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Tommasi di Vignano A., Di Zenzo G., Sudol M., Cesareni G., and Dente L. 2000. Contribution of the different modules in the utrophin carboxy-terminal region to the formation and regulation of the DAP complex. FEBS Lett. 471: 229–234.

Tong A.H., Drees B., Nardelli G., Bader G.D., Brannetti B., Castagnoli L., Evangelista M., Ferracuti S., Nelson B., Paoluzi S., Quondam M., Zucconi A., Hogue C.W., Fields S., Boone C., and Cesareni G. 2002. A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules. Science 295: 321–324.

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Vaccaro P., Brannetti B., Montecchi-Palazzi L., Philipp S., Citterich M.H., Cesareni G., and Dente L. 2001. Distinct binding specificity of the multiple PDZ domains of INADL, a human protein with homology to INAD from Drosophila melanogaster. J. Biol. Chem. 276: 42122–42130.

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Yaffe M.B., Rittinger K., Volinia S., Caron P.R., Aitken A., Leffers H., Gamblin S.J., Smerdon S.J., and Cantley L.C. 1997. The structural basis for 14-3-3:phosphopeptide binding specificity. Cell 91: 961–971.

Yan K.S., Kuti M., and Zhou M.M. 2002. PTB or not PTB—That is the question. FEBS Lett. 513: 67–70.

Zeng L. and Zhou M.M. 2002. Bromodomain: An acetyl-lysine binding domain. FEBS Lett. 513: 124–128.

Zozulya S., Lioubin M., Hill R.J., Abram C., and Gishizky M.L. 1999. Mapping signal transduction pathways by phage display. Nat. Biotechnol. 17: 1193–1198.

Zucconi A., Dente L., Santonico E., Castagnoli L., and Cesareni G. 2001. Selection of ligands by panning of domain libraries displayed on phage lambda reveals new potential partners of synaptojanin 1. J. Mol. Biol. 307: 1329–1339.

<<< Chapter 38 References            Chapter 40 References >>>

 
 
 

 
   
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